Bioinformatics Research and Applications Third International Symposium,ISBRA 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings /
| Corporate Author: | |
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| Other Authors: | , |
| Language: | English |
| Published: |
Berlin, Heidelberg :
Springer Berlin Heidelberg : Imprint: Springer,
2007.
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| Edition: | 1st ed. 2007. |
| Series: | Lecture Notes in Bioinformatics ;
4463 |
| Subjects: | |
| Online Access: | https://doi.org/10.1007/978-3-540-72031-7 |
Table of Contents:
- GFBA: A Biclustering Algorithm for Discovering Value-Coherent Biclusters
- Significance Analysis of Time-Course Gene Expression Profiles
- Data-Driven Smoothness Enhanced Variance Ratio Test to Unearth Responsive Genes in 0-Time Normalized Time-Course Microarray Data
- Efficiently Finding the Most Parsimonious Phylogenetic Tree Via Linear Programming
- A Multi-Stack Based Phylogenetic Tree Building Method
- A New Linear-Time Heuristic Algorithm for Computing the Parsimony Score of Phylogenetic Networks: Theoretical Bounds and Empirical Performance
- A Bootstrap Correspondence Analysis for Factorial Microarray Experiments with Replications
- Clustering Algorithms Optimizer: A Framework for Large Datasets
- Ranking Function Based on Higher Order Statistics (RF-HOS) for Two-Sample Microarray Experiments
- Searching for Recombinant Donors in a Phylogenetic Network of Serial Samples
- Algorithm for Haplotype Inferring Via Galled-Tree Networks with Simple Galls
- Estimating Bacterial Diversity from Environmental DNA: A Maximum Likelihood Approach
- Invited Talk: Modern Homology Search
- Statistical Absolute Evaluation of Gene Ontology Terms with Gene Expression Data
- Discovering Relations Among GO-Annotated Clusters by Graph Kernel Methods
- An Empirical Comparison of Dimensionality Reduction Methods for Classifying Gene and Protein Expression Datasets
- NEURONgrid: A Toolkit for Generating Parameter-Space Maps Using NEURON in a Grid Environment
- An Adaptive Resolution Tree Visualization of Large Influenza Virus Sequence Datasets
- Wavelet Image Interpolation (WII): A Wavelet-Based Approach to Enhancement of Digital Mammography Images
- High Level Programming Environment System for Protein Structure Data
- Finding Minimal Sets of Informative Genes in Microarray Data
- Noise-Based Feature Perturbation as a Selection Method for Microarray Data
- Efficient Generation of Biologically Relevant Enriched Gene Sets
- Space and Time Efficient Algorithms to Discover Endogenous RNAi Patterns in Complete Genome Data
- A Fast Approximate Covariance-Model-Based Database Search Method for Non-coding RNA
- Extensions of Naive Bayes and Their Applications to Bioinformatics
- The Solution Space of Sorting by Reversals
- A Fast and Exact Algorithm for the Perfect Reversal Median Problem
- Genomic Signatures from DNA Word Graphs
- Enhancing Motif Refinement by Incorporating Comparative Genomics Data
- Mining Discriminative Distance Context of Transcription Factor Binding Sites on ChIP Enriched Regions
- Enhanced Prediction of Cleavage in Bovine Precursor Sequences
- Invited Talk: A Computational Study of Bidirectional Promoters in the Human Genome
- The Identification of Antisense Gene Pairs Through Available Software
- Inferring Weak Adaptations and Selection Biases in Proteins from Composition and Substitution Matrices
- Markov Model Variants for Appraisal of Coding Potential in Plant DNA
- Predicting Palmitoylation Sites Using a Regularised Bio-basis Function Neural Network
- A Novel Kernel-Based Approach for Predicting Binding Peptides for HLA Class II Molecules
- A Database for Prediction of Unique Peptide Motifs as Linear Epitopes
- A Novel Greedy Algorithm for the Minimum Common String Partition Problem
- An Efficient Algorithm for Finding Gene-Specific Probes for DNA Microarrays
- Multiple Sequence Local Alignment Using Monte Carlo EM Algorithm
- Cancer Class Discovery Using Non-negative Matrix Factorization Based on Alternating Non-negativity-Constrained Least Squares
- A Support Vector Machine Ensemble for Cancer Classification Using Gene Expression Data
- Combining SVM Classifiers Using Genetic Fuzzy Systems Based on AUC for Gene Expression Data Analysis
- A BP-SCFG Based Approach for RNA Secondary Structure Prediction with Consecutive Bases Dependency and Their Relative Positions Information
- Delta: A Toolset for the Structural Analysis of Biological Sequences on a 3D Triangular Lattice
- Statistical Estimate for the Size of the Protein Structural Vocabulary
- Coclustering Based Parcellation of Human Brain Cortex Using Diffusion Tensor MRI
- An Algorithm for Hierarchical Classification of Genes of Prokaryotic Genomes
- Using Multi Level Nearest Neighbor Classifiers for G-Protein Coupled Receptor Sub-families Prediction
- Invited Talk: Ab Initio Gene Finding Engines: What Is Under the Hood
- Reconstruction of 3D Structures from Protein Contact Maps
- A Feature Selection Algorithm Based on Graph Theory and Random Forests for Protein Secondary Structure Prediction
- DNA Sites Buried in Nucleosome Become Accessible at Room Temperature: A Discrete-Event-Simulation Based Modeling Approach
- Comparative Analysis of Gene-Coexpression Networks Across Species
- Comparative Pathway Prediction Via Unified Graph Modeling of Genomic Structure Information
- Extending the Calculus of Looping Sequences to Model Protein Interaction at the Domain Level.